Difference between pages "Part 1: Molecular Biology Search and Analysis" and "You!"

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<a href="http://www.embl-heidelberg.de/srs/srsc?-info||ALI"><strong>3D-ALI</strong></a> - Database relating Proteins Structures and Sequences (see <a href="gopher://s-crim1.dl.ac.uk/00/EMBnet%20Bioinformation%20Resource%20UK/Data%20%26%20Software/databases/3d_ali/3d_ali.doc"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/">EMBL-Heidelberg</a>&nbsp; <br>
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<font size="3"><font size="5">You are genomics people.<br />
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&nbsp;<a href="http://www.embl-heidelberg.de/aaa.html"><strong>AA Analysis</strong>&nbsp;</a> - Protein Identification in SwissProt and PIR using Amino Acid Composition at <a href="http://www.embl-heidelberg.de/">EMBL-Heidelberg</a>&nbsp; <br>
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You contain almost complete genetic information of the whole human species in your bogy right now.&nbsp;<br />
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&nbsp;<a href="http://expasy.hcuge.ch/ch2d/aacompi.html"><strong>AA CompIdent</strong></a> - Protein Identification in SwissProt using Amino Acid Composition at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland&nbsp; <br>
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Actually, trillions of copies of them.<br />
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&nbsp;<a href="http://expasy.hcuge.ch/ch2d/aacsim.html"><strong>AA CompSim</strong></a> - Compare the Amino Acid Composition of a SwissProt Entry with Other Entries at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland&nbsp; <br>
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You are the very genomics entity of <em>Homo sapiens</em>.<br />
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&nbsp;<a href="http://chait-sgi.rockefeller.edu/cgi-bin/sequence/AA"><strong>AA Sequence Analysis</strong></a> - Multiple Analysis of a Native or Modified Amino Acid Sequence at <a href="http://www.rockefeller.edu/ru.home.html">Rockefeller U.</a>&nbsp; <br>
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It is You! Nearly the whole human species in terms of information.<br />
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&nbsp;<a href="http://www.biochem.ucl.ac.uk/~martin/abs/seqtest.html"><strong>AbCheck</strong></a> - Test an Antibody Sequence Against the Kabat Database at <a href="http://www.biochem.ucl.ac.uk/">U. College-London</a>, UK&nbsp; <br>
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Doing genomics is about understanding billions of years of information condensation in the universe. Perhaps the most beautiful information architecuture in the universe is You!.<br />
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&nbsp;<a href="http://genome.eerie.fr/fasta/align-query.html"><strong>ALIGN</strong></a> - Optimal Global Alignment of Two Sequences with No Short-cuts at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France and <a href="http://speedy.mips.biochem.mpg.de/www/programs/align.html"><strong>Align</strong></a> at <a href="http://speedy.mips.biochem.mpg.de/">MIPS</a>, Germany&nbsp; <br>
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There is every&nbsp; reason why you need to do genomics.<br />
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&nbsp;<a href="http://cbrg.inf.ethz.ch/subsection3_1_1.html"><strong>AllAll</strong></a> - Relationships in a Set of Related Peptides at <a href="http://cbrg.inf.ethz.ch/">ETH-Z&uuml;rich</a>, Switzerland&nbsp; <br>
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Let's do it together with other humans with fun, equality, and&nbsp;minimum amount of money.</font><br />
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&nbsp;<a href="http://cbrg.inf.ethz.ch/subsection3_1_2.html"><strong>AllAllDB</strong></a> - Search the All-Against-All Database of SwissProt at <a href="http://cbrg.inf.ethz.ch/">ETH-Z&uuml;rich</a>, Switzerland&nbsp; <br>
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How can you contribute to free genomics?<br />
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&nbsp;<a href="http://geoff.biop.ox.ac.uk/servers/amas_server.html"><strong>AMAS</strong></a> - Analysis of Protein Multiple Sequence Alignments at <a href="http://geoff.biop.ox.ac.uk/">U. Oxford</a>, UK&nbsp; <br>
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1) [[Please_click_here_and_sign_your_name_to_petition_the_governments_of_the_world_to_sequence_genomes_free_of_charge|You can participate in petitioning for free genome project]]<br />
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&nbsp;<a href="http://www.embl-heidelberg.de/argos/ASC.21/asc2.html"><strong>ASC</strong></a> - Analytic Surface Calculation of PDB Protein Structures at <a href="http://www.embl-heidelberg.de/">EMBL-Heidelberg</a>&nbsp; <br>
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[http://informatome.org Informatome.org]<br />
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&nbsp;<a href="http://mips11.mips.biochem.mpg.de/www/programs/atlas_per.html"><strong>ATLAS</strong></a> - Search DNA and Protein Sequence Databases at <a href="http://speedy.mips.biochem.mpg.de/">MIPS</a>, Germany&nbsp; <br>
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&nbsp;<a href="http://kiwi.imgen.bcm.tmc.edu:8088/search-launcher/launcher.html"><strong>BCM Search Launcher</strong></a> at <a images="" alt="(W3)" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20%3Cimg%20src="></a><br>
 
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<a images="" alt="(W3)" href="http://www.bcm.tmc.edu/%3EBaylor%20College%20of%20Medicine%3C/a%3E%20%3Cimg%20src=">&nbsp;</a><a href="http://dot.imgen.bcm.tmc.edu:9331/seq-search/protein-search.html"><strong>BEAUTY</strong></a> - BLAST Enhanced Alignment Utility <a href="http://dot.imgen.bcm.tmc.edu:9331/seq-search/Help/beauty.html"><strong>(see Documentation)</strong></a> at <a href="http://www.bcm.tmc.edu/">Baylor College of Medicine</a>&nbsp; <br>
 
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&nbsp;<a href="http://cammsg3.caos.kun.nl:8000/srs/srsc?-info+BERLIN"><strong>BERLIN</strong></a> - RNA Databank of 5S rRNA and 5S rRNA Gene Sequences at <a href="http://cammsg3.caos.kun.nl:8000/">CAOS/CAMM</a>, The Netherlands&nbsp; <br>
 
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&nbsp;<a href="http://sgbcd.weizmann.ac.il/Bic/ExecAppl.html"><strong>BIOACCELERATOR</strong></a> at <a href="http://bioinformatics.weizmann.ac.il:70/">Weizmann Institute of Science</a>, Israel&nbsp; <br>
 
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&nbsp;<a images="" alt="!New!" href="http://www.ocms.ox.ac.uk/~birney/cusi/biocusi.html%3E%3Cb%3EbioCUSI%3C/b%3E%3C/a%3E%3Cimg%20src=">- Multiple Access to Biological Servers at </a><a href="http://www.ocms.ox.ac.uk/">OCMS-Oxford</a>&nbsp; <br>
 
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&nbsp;<a href="ftp://pdb.pdb.bnl.gov/user_group/biological_units"><strong>Biological Units</strong></a> - Expanded PDB Entries with Full Biological Units at <a href="http://suntid.bnl.gov:8080/bnl.html">Brookhaven National Laboratory</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.ocms.ox.ac.uk/~birney/palette.html"><strong>Biologist's Search Palette</strong></a> - Collection of Search Engines for Biological Databases at <a href="http://www.ocms.ox.ac.uk/">Oxford U.</a>, UK&nbsp; <br>
 
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&nbsp;<a href="http://www.ncbi.nlm.nih.gov/Recipon/bs_seq.html"><strong>BLAST</strong></a> - Basic Local Alignment Research Tool at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a>, <a href="http://swarmer.stanford.edu/cgi-bin/blastq-form?options=simple"><strong>BLAST</strong></a> (hiv, vector, etc) at <a href="http://motif.stanford.edu/">Stanford U.</a>, <a href="http://www.genome.ad.jp/SIT/BLAST.html"><strong>BLAST</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan, <a href="http://genome.eerie.fr/blast/blast-query.html"><strong>BLAST</strong></a> at <a href="http://genome.eerie.fr/home.html">EERIE-Nimes</a>, France, <a href="http://www.crihan.fr/www/blast.html"><strong>BLAST</strong></a> at <a href="http://www.crihan.fr/">CRIHAN</a>, France <a href="http://dot.imgen.bcm.tmc.edu:9331/cgi-bin/seq-search/blast_form_local.pl"><strong>BLAST</strong></a> (with Entrez and SRS Links) at <a href="http://gc.bcm.tmc.edu:8088/">Baylor College of Medicine</a> and <a href="http://ulrec3.unil.ch/software/EPFLBLAST_form.html"><strong>BLAST</strong></a> at <a href="http://www.epfl.ch/">EPFL</a>, Switzerland&nbsp; <br>
 
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&nbsp;<a href="http://dot.imgen.bcm.tmc.edu:9331/seq-search/Option/blastpat.html"><strong>BLASTPAT</strong></a> - BLAST-based Pattern Database Search (see <a href="http://dot.imgen.bcm.tmc.edu:9331/seq-search/Help/blastpat.html"><strong>Documentation</strong></a>) at <a href="http://gc.bcm.tmc.edu:8088/">Baylor College of Medicine</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.embl-heidelberg.de/searches/blitz_input.html"><strong>BLITZ</strong></a> (see <a href="http://www.ebi.ac.uk/searches/blitz_doc.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/">EMBL-Heidelberg</a> and <a href="http://www.ebi.ac.uk/searches/blitz_input.html"><strong>BLITZ</strong></a> at <a href="http://www.ebi.ac.uk/">EBI</a>, UK&nbsp; <br>
 
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&nbsp;<a href="http://www.blocks.fhcrc.org/"><strong>BLOCKS</strong></a> - Database of Highly Conserved Regions in Proteins&nbsp; and <a href="gopher://klaatu.fhcrc.org/77/.indexes/.blocksindex/blocksindex"><strong>BLOCKS-WAIS</strong></a>&nbsp; at <a href="gopher://klaatu.fhcrc.org/">Fred Hutchinson Cancer Research Center</a>, <a href="http://www.embl-heidelberg.de/srs/srsc?-info||BLOCKS"><strong>BLOCKS</strong></a> at <a href="http://www.embl-heidelberg.de/">EMBL-Heidelberg</a> and <a href="http://www.public.iastate.edu/~pedro/blocks_query.html"><strong>BLOCKS-Search</strong></a> w/ search from <a href="http://www.cc.iastate.edu/welcome.html">Iowa State</a>&nbsp; <br>
 
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&nbsp;<a href="http://bimas.dcrt.nih.gov/sql/BMRBgate.html"><strong>BioMagResBank</strong></a> - A Database of NMR-Derived Protein Structures at <a href="http://bimas.dcrt.nih.gov/">BIMAS-NIH</a>&nbsp; <br>
 
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&nbsp;<a href="http://genome.cs.unc.edu/online.html"><strong>BioSCAN</strong></a> - Biological Sequence Comparative Analysis at <a href="http://genome.cs.unc.edu/">U. North Caroline</a>&nbsp; <br>
 
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&nbsp;<a href="http://ibm4.carb.nist.gov:4400/bmcd/bmcd.html"><strong>BMCD</strong></a> - Biological Macromolecule Crystallization Database at <a href="http://ibm4.carb.nist.gov:4400/carb.html">CARB</a>&nbsp; <br>
 
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&nbsp;<a href="http://ulrec3.unil.ch/software/BOX_form.html"><strong>BOXSHADE</strong></a> - Pretty Printing and Shading of Multiple-Sequence Alignments at <a href="http://ulrec3.unil.ch/">ISREC</a>, Switzerland&nbsp; <br>
 
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&nbsp;<a href="http://www.biochem.ucl.ac.uk/bsm/cath/CATHintro.html"><strong>CATH</strong></a> - Protein Structure Classification at <a href="http://www.biochem.ucl.ac.uk/">UCL-London</a>, UK&nbsp; <br>
 
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&nbsp;<a href="http://ibc.wustl.edu/msa/clustal.cgi"><strong>CLUSTALW</strong></a> - Multiply Sequence Alignments at <a href="http://ibc.wustl.edu/">IBC-Washington U.</a>&nbsp; <br>
 
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&nbsp;<a href="http://alces.med.umn.edu/cuse.html"><strong>Codon Usage</strong></a> - Analysis of Different ORFs in a Gene Sequence at <a href="http://www.umn.edu/">U. Minnesota</a>&nbsp; <br>
 
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&nbsp;<a href="http://ulrec3.unil.ch/software/COILS_form.html"><strong>Coils</strong></a> - Prediction of Coiled Coil Regions in Protein Sequences at <a href="http://ulrec3.unil.ch/">ISREC</a>, Switzerland&nbsp; <br>
 
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&nbsp;<a href="http://ben.vub.ac.be/srs/srsc?-info+CPGISLE"><strong>CpGIsle</strong></a> - CpG Islands Database at <a href="http://ben.vub.ac.be/">BEN</a>, Belgium&nbsp; <br>
 
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&nbsp;<a href="http://cbrg.inf.ethz.ch/subsection3_1_7.html"><strong>Darwin</strong></a> - Data Analysis and Retrieval With Indexed Nucleotide/Peptide Sequences at <a href="http://cbrg.inf.ethz.ch/">ETH-Z&uuml;rich</a>, Switzerland&nbsp; <br>
 
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&nbsp;<a href="http://www.ncbi.nlm.nih.gov/dbEST/index.html"><strong>dbEST</strong></a> - Database of Expressed Sequence Tags at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.genome.ad.jp/dbget/dbget.html"><strong>DBGET</strong></a> - Integrated Database Retrieval System (w/ <a href="http://www.genome.ad.jp/dbget/dbget.links.html"><strong>diagram links</strong></a>) at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan&nbsp; <br>
 
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&nbsp;<a href="gopher://gopher.nig.ac.jp/7waissrc%3a/DDBJ_Gopher_WAIS/DNA_seq_index_search.src"><strong>DDBJ</strong></a> - DNA Database of Japan at <a href="http://www.nig.ac.jp/">National Institute of Genetics</a>, Japan&nbsp; <br>
 
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&nbsp;<a href="http://alces.med.umn.edu/rawdot.html"><strong>Dot Plot</strong></a> - Compare a DNA Sequence with Itself at <a href="http://www.umn.edu/">U. Minnesota</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.nih.gov/molecular_modeling/drugbank.html"><strong>DrugBank</strong></a> - Three-dimensional Drug Structure Databank at <a href="http://www.nih.gov/">NIH</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.embl-heidelberg.de/srs/srsc?-info+DSSP"><strong>DSSP</strong></a> - Database of Secondary Structure of Proteins from PDB (see <a href="http://www.sander.embl-heidelberg.de/dssp/descrip.html"><strong>Documentation</strong></a>) at <a href="http://www.embl-heidelberg.de/">EMBL-Heidelberg</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.gdb.org/Dan/proteins/ec-enzyme.html"><strong>EC Enzyme</strong></a> at <a href="http://www.gdb.org/hopkins.html">Johns Hopkins</a> and <a href="http://www.genome.ad.jp/htbin/show_ECtable"><strong>EC Number Table</strong></a> at <a href="http://www.genome.ad.jp/">GenomeNet</a>, Japan and <a href="http://specter.dcrt.nih.gov:8004/Enzymes/enzymes.html"><strong>GenoBase Enzyme Index</strong></a> at <a href="http://www.nih.gov/">NIH</a>&nbsp; <br>
 
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&nbsp;<a href="http://susi.bio.uni-giessen.de/usr/local/www/html/ecdc.html"><strong>ECDC</strong></a> - <em>E. coli</em> Database Collection at <a href="http://www.uni-giessen.de/">Uni-Gie&szlig;en</a>, Germany&nbsp; <br>
 
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&nbsp;<a href="gopher://biox.embnet.unibas.ch:13021/77/.index/embl/index"><strong>EMBL</strong></a> - Nucleotide Sequence Database and <a href="gopher://biox.embnet.unibas.ch:13021/77/.index/xembl/index"><strong>EMBL-New Entries</strong></a> at <a href="http://www.ch.embnet.org/">EMBnet-Basel</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.ebi.ac.uk/srs/srsc?-info||EMNEW"><strong>EMNEW</strong></a> - Index of New EMBL Sequences at <a href="http://www.ebi.ac.uk/">EBI</a>, UK&nbsp; <br>
 
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<a href="http://specter.dcrt.nih.gov:8004/Compound/compound_toc_by_name.html"><strong>EMP Compound</strong></a> and <a href="http://specter.dcrt.nih.gov:8004/Pathway/pathway_toc_by_name.html"><strong>EMP Pathways</strong></a> - Selkov Enzyme and Metabolic Pathway (EMP) Database at <a href="http://www.nih.gov/">NIH</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.mcs.anl.gov/home/towell/metabhome.html"><strong>EMP Metabolic Pathways</strong></a> - Navigation in Metabolic Pathways from <a href="http://www.mcs.anl.gov/home/compbio/default.html">MCS-Computational Biology</a> at <a href="http://www.anl.gov/">Argonne National Laboratory</a>&nbsp; <br>
 
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&nbsp;<a href="http://www.ncbi.nlm.nih.gov/Search/Entrez/index.html"><strong>ENTREZ</strong></a> - Protein and Nucleotide Database (see <a href="http://atlas.nlm.nih.gov:5700/WWW2/WWW2_paper2.html"><strong>Documentation</strong></a>) at <a href="http://www.ncbi.nlm.nih.gov/">NCBI</a>&nbsp; <br>
 
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&nbsp;<a href="http://expasy.hcuge.ch/sprot/enzyme.html"><strong>ENZYME</strong></a> - The Enzyme Data Bank at <a href="http://expasy.hcuge.ch/">ExPASy</a>, Switzerland&nbsp; <br>
 
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Revision as of 06:12, 18 January 2008

You are genomics people.

You contain almost complete genetic information of the whole human species in your bogy right now. 
Actually, trillions of copies of them.

You are the very genomics entity of Homo sapiens.

It is You! Nearly the whole human species in terms of information.

Doing genomics is about understanding billions of years of information condensation in the universe. Perhaps the most beautiful information architecuture in the universe is You!.

There is every  reason why you need to do genomics.

Let's do it together with other humans with fun, equality, and minimum amount of money.


How can you contribute to free genomics?
1) You can participate in petitioning for free genome project

Informatome.org

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