Difference between revisions of "Genome sequence mapping"
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[http://www.sanger.ac.uk/Users/lh3/seq-nt.html Bioinformatics resources for the next-generation sequencing technology ]<br /> | [http://www.sanger.ac.uk/Users/lh3/seq-nt.html Bioinformatics resources for the next-generation sequencing technology ]<br /> | ||
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| − | [http://bioit.dbi.udel.edu/howto/eland Eland(Efficient Local Alignment of Nucleotide Data]<br /> | + | [http://bioit.dbi.udel.edu/howto/eland Eland(Efficient Local Alignment of Nucleotide Data)]<br /> |
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| + | [http://rulai.cshl.edu/rmap/ RMAP: A Program for mapping Solexa reads]<br /> | ||
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| + | [http://compbio.cs.toronto.edu/shrimp/ SHRiMP-SHort Read Mapping Package]<br /> | ||
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| + | [http://maq.sourceforge.net/index.shtml Maq: Mapping and Assembly with Qualities]<br /> | ||
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| + | [http://soap.genomics.org.cn/# SOAP-Short Oligonucleotide Analysis Package]<br /> | ||
| + | <br /> | ||
| + | [http://www.sanger.ac.uk/Software/analysis/SSAHA2/ SSAHA2(Sequence Search and Alignment by Hashing Algorithm)]<br /> | ||
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Latest revision as of 10:36, 13 February 2009
Genome sequence mapping algorithms
Bioinformatics resources for the next-generation sequencing technology
Eland(Efficient Local Alignment of Nucleotide Data)
RMAP: A Program for mapping Solexa reads
SHRiMP-SHort Read Mapping Package
Maq: Mapping and Assembly with Qualities
SOAP-Short Oligonucleotide Analysis Package
SSAHA2(Sequence Search and Alignment by Hashing Algorithm)
